PIPES monosodium
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MedKoo CAT#: 464428

CAS#: 10010-67-0

Description: PIPES is frequently used as a buffering agent in biochemistry. It is useful in cell culture work. It has been documented to minimize lipid loss when buffering glutaraldehyde histology in plant and animal tissues.


Chemical Structure

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PIPES monosodium
CAS# 10010-67-0

Theoretical Analysis

MedKoo Cat#: 464428
Name: PIPES monosodium
CAS#: 10010-67-0
Chemical Formula: C8H17N2NaO6S2
Exact Mass: 0.00
Molecular Weight: 324.342
Elemental Analysis: C, 29.63; H, 5.28; N, 8.64; Na, 7.09; O, 29.60; S, 19.77

Price and Availability

Size Price Availability Quantity
10mg USD -2 2 Weeks
50mg USD -2 2 Weeks
200mg USD -2 2 Weeks
1g USD -2 2 Weeks
2g USD -2 2 Weeks
5g USD -2 2 Weeks
25g USD 220 2 Weeks
100g USD 430 2 Weeks
500g USD 990 2 Weeks
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Synonym: PIPES monosodium;

IUPAC/Chemical Name: sodium 2-(4-(2-sulfoethyl)piperazin-1-yl)ethane-1-sulfonate

InChi Key: OGGAIRCLBMGXCZ-UHFFFAOYSA-M

InChi Code: InChI=1S/C8H18N2O6S2.Na/c11-17(12,13)7-5-9-1-2-10(4-3-9)6-8-18(14,15)16;/h1-8H2,(H,11,12,13)(H,14,15,16);/q;+1/p-1

SMILES Code: OS(=O)(CCN1CCN(CC1)CCS(=O)([O-])=O)=O.[Na+]

Appearance: Solid powder

Purity: >98% (or refer to the Certificate of Analysis)

Shipping Condition: Shipped under ambient temperature as non-hazardous chemical. This product is stable enough for a few weeks during ordinary shipping and time spent in Customs.

Storage Condition: Dry, dark and at 0 - 4 C for short term (days to weeks) or -20 C for long term (months to years).

Solubility: To be determined

Shelf Life: >2 years if stored properly

Drug Formulation: To be determined

Stock Solution Storage: 0 - 4 C for short term (days to weeks), or -20 C for long term (months).

HS Tariff Code: 2934.99.9001

More Info:

Product Data:
Biological target: PIPES is frequently used as a buffering agent in biochemistry.
In vitro activity: The incubation of MP (myofibrillar protein) suspensions (20 mg mL-1 in piperazine-N,N'-bis(2-ethanesulfonic acid) buffer, with 0.6 mol L-1 sodium chloride, pH 6.25) at 4 °C for 24 h under an iron-catalyzed hydroxyl radical generating system (Fenton reaction) promoted the formation of thiobarbituric acid reactive substances and protein carbonyls, which was attenuated by EC (5, 50, and 100 μmol g-1 protein). Reduced protein sulfhydryl content, tryptophan fluorescence, protein solubility, as well as increased surface hydrophobicity were found by the co-incubation of EC. Analysis by scanning electron microscopy revealed increased protein aggregation and fragments in oxidized MP, which were further enhanced by the addition of EC. However, the protein digestibility of MP was not affected. Reference: J Sci Food Agric. 2021 Jan 30;101(2):746-753. https://pubmed.ncbi.nlm.nih.gov/32706121/
In vivo activity: This study found that piperazine-N,N'-bis(ethanesulfonic acid) (PIPES) and 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES), two zwitterionic buffers commonly used in tissue fixation, can cause severe lumen and cell morphological defects in Drosophila pupal and adult retina; the inter-rhabdomeral lumen becomes dilated and the photoreceptor cells are significantly reduced in size. Correspondingly, the localization pattern of Eyes shut (EYS), a luminal protein, is severely altered. In contrast, tissues fixed in the phosphate buffered saline (PBS) buffer results in lumen and cell morphologies that are consistent with live imaging. Reference: BMC Dev Biol. 2015 Feb 3;15:10. https://pubmed.ncbi.nlm.nih.gov/25645690/

Solubility Data

Solvent Max Conc. mg/mL Max Conc. mM
Solubility
0.1M NaOH 250.0 0.00

Preparing Stock Solutions

The following data is based on the product molecular weight 324.34 Batch specific molecular weights may vary from batch to batch due to the degree of hydration, which will affect the solvent volumes required to prepare stock solutions.

Recalculate based on batch purity %
Concentration / Solvent Volume / Mass 1 mg 5 mg 10 mg
1 mM 1.15 mL 5.76 mL 11.51 mL
5 mM 0.23 mL 1.15 mL 2.3 mL
10 mM 0.12 mL 0.58 mL 1.15 mL
50 mM 0.02 mL 0.12 mL 0.23 mL
Formulation protocol: 1. Xu M, Sun M, Lu C, Han Y, Yao X, Niu X, Xu M, Zhu Q. Influence of epicatechin on oxidation-induced physicochemical and digestibility changes in porcine myofibrillar proteins during refrigerated storage. J Sci Food Agric. 2021 Jan 30;101(2):746-753. doi: 10.1002/jsfa.10687. Epub 2020 Aug 19. PMID: 32706121. 2. Hugel S, Kadiri N, Rodeau JL, Gaillard S, Schlichter R. pH-dependent inhibition of native GABA(A) receptors by HEPES. Br J Pharmacol. 2012 Aug;166(8):2402-16. doi: 10.1111/j.1476-5381.2012.01956.x. PMID: 22452286; PMCID: PMC3448902. 3. Nie J, Mahato S, Zelhof AC. Imaging the Drosophila retina: zwitterionic buffers PIPES and HEPES induce morphological artifacts in tissue fixation. BMC Dev Biol. 2015 Feb 3;15:10. doi: 10.1186/s12861-015-0056-y. PMID: 25645690; PMCID: PMC4320506.
In vitro protocol: 1. Xu M, Sun M, Lu C, Han Y, Yao X, Niu X, Xu M, Zhu Q. Influence of epicatechin on oxidation-induced physicochemical and digestibility changes in porcine myofibrillar proteins during refrigerated storage. J Sci Food Agric. 2021 Jan 30;101(2):746-753. doi: 10.1002/jsfa.10687. Epub 2020 Aug 19. PMID: 32706121. 2. Hugel S, Kadiri N, Rodeau JL, Gaillard S, Schlichter R. pH-dependent inhibition of native GABA(A) receptors by HEPES. Br J Pharmacol. 2012 Aug;166(8):2402-16. doi: 10.1111/j.1476-5381.2012.01956.x. PMID: 22452286; PMCID: PMC3448902.
In vivo protocol: 1. Nie J, Mahato S, Zelhof AC. Imaging the Drosophila retina: zwitterionic buffers PIPES and HEPES induce morphological artifacts in tissue fixation. BMC Dev Biol. 2015 Feb 3;15:10. doi: 10.1186/s12861-015-0056-y. PMID: 25645690; PMCID: PMC4320506.

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1: Arakawa T, Timasheff SN. The mechanism of action of Na glutamate, lysine HCl, and piperazine-N,N'-bis(2-ethanesulfonic acid) in the stabilization of tubulin and microtubule formation. J Biol Chem. 1984 Apr 25;259(8):4979-86. PMID: 6325414.

2: Roy RN, Gibbons JJ, Padron JL, Buechter K, Faszholz S, Doan H. Revised values of the paH of monosodium 1,4-piperazinediethanesulfonate ("Pipes') in water and other buffers in isotonic saline at various temperatures. Clin Chem. 1981 Oct;27(10):1787-8. PMID: 6269781.