OGDA
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    WARNING: This product is for research use only, not for human or veterinary use.

MedKoo CAT#: 465598

CAS#: unknown

Description: OGDA is a green fluorescent D-amino acid. Suitable for labeling peptidoglycans in live bacteria. OGDA is efficiently incorporated into the peptidoglycans of gram-positive and some gram-negative bacteria. Compatible with STED microscopy, OGDA labelled bacteria can be imaged by super-resolution stimulated emission depletion (STED) at a resolution below 100 nm. Photo-stable. Excitation/emission λ ~501/526 nm.


Chemical Structure

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OGDA
CAS# unknown

Theoretical Analysis

MedKoo Cat#: 465598
Name: OGDA
CAS#: unknown
Chemical Formula: C24H16F2N2O8
Exact Mass: 498.0875
Molecular Weight: 498.3948
Elemental Analysis: C, 57.84; H, 3.24; F, 7.62; N, 5.62; O, 25.68

Price and Availability

Size Price Availability Quantity
5.0mg USD 510.0 2 Weeks
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Synonym: OGDA; OG fluorescent D-amino acid; OG FDAA; OGFDAA; OG-FDAA;

IUPAC/Chemical Name: (R)-2-amino-3-(2',7'-difluoro-3',6'-dihydroxy-3-oxo-3H-spiro[isobenzofuran-1,9'-xanthene]-6-carboxamido)propanoic acid

InChi Key: RFRUFDKIAPOSBS-MRXNPFEDSA-N

InChi Code: InChI=1S/C24H16F2N2O8/c25-14-4-12-19(6-17(14)29)35-20-7-18(30)15(26)5-13(20)24(12)11-3-9(1-2-10(11)23(34)36-24)21(31)28-8-16(27)22(32)33/h1-7,16,29-30H,8,27H2,(H,28,31)(H,32,33)/t16-/m1/s1

SMILES Code: O=C(C1=CC=C(C(OC23C4=C(C=C(C(F)=C4)O)OC5=C3C=C(F)C(O)=C5)=O)C2=C1)NC[C@@H](N)C(O)=O

Appearance: Solid powder

Purity: >98% (or refer to the Certificate of Analysis)

Shipping Condition: Shipped under ambient temperature as non-hazardous chemical. This product is stable enough for a few weeks during ordinary shipping and time spent in Customs.

Storage Condition: Dry, dark and at 0 - 4 C for short term (days to weeks) or -20 C for long term (months to years).

Solubility: To be determined

Shelf Life: >2 years if stored properly

Drug Formulation: To be determined

Stock Solution Storage: 0 - 4 C for short term (days to weeks), or -20 C for long term (months).

HS Tariff Code: 2934.99.9001

Solubility Data

Solvent Max Conc. mg/mL Max Conc. mM
Solubility
DMSO 49.84 100.0

Preparing Stock Solutions

The following data is based on the product molecular weight 498.3948 Batch specific molecular weights may vary from batch to batch due to the degree of hydration, which will affect the solvent volumes required to prepare stock solutions.

Recalculate based on batch purity %
Concentration / Solvent Volume / Mass 1 mg 5 mg 10 mg
1 mM 1.15 mL 5.76 mL 11.51 mL
5 mM 0.23 mL 1.15 mL 2.3 mL
10 mM 0.12 mL 0.58 mL 1.15 mL
50 mM 0.02 mL 0.12 mL 0.23 mL

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1: Söderström B, Ruda A, Widmalm G, Daley DO. An OregonGreen488-labelled d-amino acid for visualizing peptidoglycan by super-resolution STED nanoscopy. Microbiology (Reading). 2020 Dec;166(12):1129-1135. doi: 10.1099/mic.0.000996. PMID: 33237852.

OGDA

5.0mg / USD 510.0